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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890125.1_cds_XP_016444793.1_39818
CDS Infomation

[gene=LOC107770046] [db_xref=GeneID:107770046] [protein=vacuolar amino acid transporter 1-like] [protein_id=XP_016444793.1] [location=join(28052..28260,29406..29719,29809..30023,30284..30307,30417..30597,31037..31256,31479..31614,31697..31716,32027..32172,32505..32548,32654..32716,33568..33660)] [gbkey=CDS]
Sequence

ATGAAGAATTCTGTCTCTGAACATAGTTTCTACATTGAGAGCGACGACGACGATGATCAT
CAGGAGGAGAAGCAATTGGATAAACCTGAAAATGAAGATGGAAATGACTCTGATTCTTCC
AATTACTCTAATGATGATAACAATGAAAACGATTTCCCGGACAGCAAACCGAGTTCTTTC
AACCCTCCTGCTTGGCCTCAAAGTTACAGGCAATCTATGGATATATATAGTAGTGTACCG
TCTCCAAGTCTTACTTTCCTGGGGACACCTTCATTAACACGTTTAGGCAGCTCGTTCCTT
GCCTCATCACTTACAAGGAGACACACTCCTGAAGTGTTACCCTCTCTTCATAAACCTCTC
ATAGGAGACGAGCAAGCACCACATGAGCGACGTAGCTCTCATACTTTGTTGCCTCCTCTT
CCGTCAAGGAGGTCTGCTATTAAGAAATTTCCTGATGAGAAATCGGTTGCACATGAATTT
CCAGTTTCCCGTCAAAGTTCCTATGGCCAAGGCGTGCTAAATGGTATTAATGTTCTATGT
GGAGTAGGAATCCTTTCTACTCCTTATGCTGTGAAGGAAGGTGGATGGGCAGGGCTTTCT
ATATTATTCATCTTCGGTGTGCTATCTTACTATACTGGCATTCTCCTCAGATACTGCTTG
GACAGCCAACCAGGGCTCGAGACTTATCCGGATATTGGTCAGGCAGCCTTTGGTACAGTG
GGAAGAATTATCATATCGATAATATTATACGTGGAATTATATTCCTGTTGTGTTGAATAC
ATAATTTTGGAGGGCGATAACCTGTCGGCTTTATTTCCAAATGCACATTTAAATTTGGGA
GGGTTTCAATTAGATGCACGGCATCTCTTTGCTTTGATAACCACCTTAGCTGTTCTTCCT
ACCGTTTGGTTGCGCGATCTCACAGTTCTTAGTTGCATCTCAGCTGGAGGAGTTATTGCT
TCTGTAATGGTCGTCATTTGCTTGTACTGGCTTGGCTTAGTGGATCATGTTGGCTCTCAA
AGCGAACATACTGTACTGAATGTTTCTAGTCTCCCTGTTGCTATCGGACTTTATGGATAC
TGTTACTCCGGACATGCAGTTTTTCCCAATATATATACATCATTGGAGAAACGCAGTCAA
TTCCCTGCTGTCCTCTTAACCAGTTTCGGTATTGTGACTGTGTTGTATGCTGGAGCAGCT
GTGATGGGATACATGATGTTTGGCGACTCAGCTGAATCCCAGTTTACTCTAAACTTGCCC
ACAAATTTAGTTGCCTCCAAAATTGCTTTTTGGACAACCATTGTTAATCCATTCACAAAA
TATGCTTTAACCATGGCCCCTGTTGCTATGAGTTTGGAGGAGTTGATACCATCGAACCAC
GCCAAATCTCACATGTACGGAGTCCTTATTAGAACTGCACTTGTGATATCCACATTACTT
GTGGCGCTTAAAGTTCCTTTTTTTGGATTTGTGATGGCATTGATTGGATCATTATTTACA
ATGCTAGTTACATTGATCCTACCTTGTGCTTGCTTCTTGAGAATATTGAAAGGAAAAACA
AGTCCAATTCAGGTATCAGCATGTATACTTATTATCATAATTGGTGTCATATCAGCAGTT
ATTGGGTCCTATTCAGCTCTCTCCAAAATCATCCAAAGTTTATGA

Peptide Sequence

PEP ID

XP_016444793.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tabacum]
Sequence

MKNSVSEHSFYIESDDDDDHQEEKQLDKPENEDGNDSDSSNYSNDDNNENDFPDSKPSSF
NPPAWPQSYRQSMDIYSSVPSPSLTFLGTPSLTRLGSSFLASSLTRRHTPEVLPSLHKPL
IGDEQAPHERRSSHTLLPPLPSRRSAIKKFPDEKSVAHEFPVSRQSSYGQGVLNGINVLC
GVGILSTPYAVKEGGWAGLSILFIFGVLSYYTGILLRYCLDSQPGLETYPDIGQAAFGTV
GRIIISIILYVELYSCCVEYIILEGDNLSALFPNAHLNLGGFQLDARHLFALITTLAVLP
TVWLRDLTVLSCISAGGVIASVMVVICLYWLGLVDHVGSQSEHTVLNVSSLPVAIGLYGY
CYSGHAVFPNIYTSLEKRSQFPAVLLTSFGIVTVLYAGAAVMGYMMFGDSAESQFTLNLP
TNLVASKIAFWTTIVNPFTKYALTMAPVAMSLEELIPSNHAKSHMYGVLIRTALVISTLL
VALKVPFFGFVMALIGSLFTMLVTLILPCACFLRILKGKTSPIQVSACILIIIIGVISAV
IGSYSALSKIIQSL

Transcript Sequence

Gene sequence data has not been registered.